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Readme.md
In fcScan: fcScan for detecting clusters of coordinates with user defined options
fcScan
fcScan is a Bioconductor package aiming at clustering genomic features based on a defined window size and combination of sites.
Dependencies
The below R packages are required for installation:
- stats
- plyr
- utils
- VariantAnnotation
- SummarizedExperiment
- rtracklayer
- GenomicRanges
- IRanges
Installation
- Git clone the project directory
git clone https://github.com/pkhoueiry/fcScan.git
- From the terminal run
R CMD build fcScan
- Run
R CMD check fcScan_1.3.1.tar.gz
- Run
R CMD BiocCheck fcScan_1.3.1.tar.gz
- Install package by
R CMD INSTALL fcScan_1.3.1.tar.gz
- Start R and load library using
library(fcScan)
Try the fcScan package in your browser
Any scripts or data that you put into this service are public.
fcScan documentation built on Nov. 8, 2020, 5:43 p.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
fcScan
fcScan is a Bioconductor package aiming at clustering genomic features based on a defined window size and combination of sites.
Dependencies
The below R packages are required for installation:
- stats
- plyr
- utils
- VariantAnnotation
- SummarizedExperiment
- rtracklayer
- GenomicRanges
- IRanges
Installation
- Git clone the project directory
git clone https://github.com/pkhoueiry/fcScan.git - From the terminal run
R CMD build fcScan - Run
R CMD check fcScan_1.3.1.tar.gz - Run
R CMD BiocCheck fcScan_1.3.1.tar.gz - Install package by
R CMD INSTALL fcScan_1.3.1.tar.gz - Start R and load library using
library(fcScan)
Try the fcScan package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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