FlowJo is a commercial GUI based software package from TreeStar Inc. for the visualization and analysis of flow cytometry data. One of the FlowJo standard export file types is the "FlowJo Workspace". This is an XML document that describes files and manipulations that have been performed in the FlowJo GUI environment. This package can take apart the FlowJo workspace and deliver the data into R in the flowCore paradigm.
|Author||John J. Gosink <firstname.lastname@example.org>|
|Date of publication||None|
|Maintainer||John J. Gosink <email@example.com>|
collectSummaryFlowInfo: Collect Population Statistics on Flow Files
createFlowReport: Produce a denormalized data frame of summary statistics and...
flowFlowJo-package: Turn FlowJo workspaces into flowCore compliant objects
flowJoCompensate-methods: Compensate flow cytometry data the same way as FlowJo does
getFlowJoSummary: Summarize FlowJo Workspaces
readFlowJoList: Parse one or more FlowJo workspaces
simplifyGateNames: Standardize flow cytometry gate names