plot: Scatterplot of Clustering Results

In flowMeans: Non-parametric Flow Cytometry Data Gating

Description

This method generates scatterplot revealing the cluster assignment.

Usage

## S4 method for signature 'ANY,Populations'
plot(x, y, varNames=NULL, ...)
## S4 method for signature 'flowFrame,Populations'
plot(x, y, varNames=NULL, ...)

Arguments

x	A matrix, data frame of observations, or object of class flowFrame. This is the object on which flowClust was performed.
y	Object returned from flowMeans.
varNames	A character vector specifying the variables (columns) to be included in the plot. When it is left unspecified, all the variables will be used.
...	Extra parameters that will be passed to the generic plot function

Author(s)

Nima Aghaeepour <[e-mail]>

See Also

flowMeans

Examples

library(flowMeans)
data(x)
plot(data.frame(x))

Example output

Warning messages:
1: In rgl.init(initValue, onlyNULL) : RGL: unable to open X11 display
2: 'rgl_init' failed, running with rgl.useNULL = TRUE 
3: .onUnload failed in unloadNamespace() for 'rgl', details:
  call: fun(...)
  error: object 'rgl_quit' not found 
4: no DISPLAY variable so Tk is not available 

flowMeans documentation built on Nov. 8, 2020, 4:51 p.m.