focalCall: Detection of focal aberrations in DNA copy number data

Detection of genomic focal aberrations in high-resolution DNA copy number data

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("focalCall")
AuthorOscar Krijgsman
Bioconductor views Microarray Preprocessing Sequencing Visualization
Date of publicationNone
MaintainerOscar Krijgsman <oscarkrijgsman@gmail.com>
LicenseGPL-2
Version1.10.0
https://github.com/OscarKrijgsman/focalCall

View on Bioconductor

Files

DESCRIPTION
NAMESPACE
NEWS
R
R/FreqPlot.R R/FreqPlotfocal.R R/focalCall.R R/igvFiles.R R/private.R R/singleSample.R
README.md
build
build/vignette.rds
data
data/BierkensCNA.RData
inst
inst/doc
inst/doc/focalCall.R
inst/doc/focalCall.Rnw
inst/doc/focalCall.pdf
inst/unitTests
inst/unitTests/focalCall_unitTests.R
man
man/BierkensCNA.Rd man/FreqPlot.Rd man/FreqPlotfocal.Rd man/focalCall.Rd man/igvFiles.Rd man/singleSample.Rd
tests
tests/runTests.R
vignettes
vignettes/focalCall.Rnw
vignettes/focalCall.bib

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