Man pages for gage
Generally Applicable Gene-set Enrichment for Pathway Analysis
| eg2sym | Conversion between Entrez Gene IDs and official gene symbols... |
| egSymb | Mapping between Entrez Gene IDs and official symbols |
| esset.grp | The non-redundant signcant gene set list |
| essGene | Essential member genes in a gene set |
| gage | GAGE (Generally Applicable Gene-set Enrichment) analysis |
| gageComp | Compare multiple GAGE analyses results |
| gage-internal | Internal functions |
| gagePipe | GAGE analysis pipeline |
| geneData | View the expression data for selected genes |
| go.gsets | Generate up-to-date GO (Gene Ontology) gene sets |
| gse16873 | GSE16873: a breast cancer microarray dataset |
| gs.tTest | Gene set differential expression test |
| heter.gage | GAGE analysis for heterogeneous data |
| kegg.gs | Common gene set data collections |
| kegg.gsets | Generate up-to-date KEGG pathway gene sets |
| readExpData | Read in expression data |
| readList | Read in gene set data as a named list |
| sigGeneSet | Significant gene set from GAGE analysis |
