synthMarkers_Matrix: Example of marker descriptor data matrix

In gaia: GAIA: An R package for genomic analysis of significant chromosomal aberrations.

Description

This matrix simulates the marker descriptors of 24 chromosomes (of 1000 probes) where the start and the end position of each probe coincide.

Usage

data(synthMarkers_Matrix)

Format

This data matrix is organized as a matrix having a row for each measured probe. Each probe is described by the following columns:
Probe Name - Chromosome - Start

Where: "Probe Name" is the name of the observed probe; "Chromosome" is the chromosome where the probe is located and "Start" is the start point (in bp) of the probe. Note that the matrix can have also a column ("End") specifying the position in which the probe ends, this column is optional and if it is missed than start and the end positions will coincide.
synthMarkers_Matrix reports the marker descriptor for 24 chromosomes of 1000 probes (where the sex chromosomes X and Y are indicated with 23 and 24 respectively.

Author(s)

Sandro Morganella et al.

Maintainer: S. Morganella <[e-mail]>

Examples

data(synthMarkers_Matrix)

gaia documentation built on Nov. 8, 2020, 8:02 p.m.