txdb: Create a TxDb from a GenBank record
In genbankr: Parsing GenBank files into semantically useful objects
Description
Usage
Arguments
Value
Examples
Description
Create a TxDb object from a GenBankRecord.
Usage
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makeTxDbFromGenBank(gbr, reassign.ids = FALSE)
## S4 method for signature 'GenBankRecord'
makeTxDbFromGenBank(gbr, reassign.ids = FALSE)
## S4 method for signature 'GBAccession'
makeTxDbFromGenBank(gbr, reassign.ids = FALSE)
Arguments
gbr
A GenBankRecord or GBAccession object
reassign.ids
logical. Passed down to makeTxDb
Value
A TxDb object
Examples
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thing = readGenBank(system.file("unitTests/compjoin.gbk", package="genbankr"))
tx = makeTxDbFromGenBank(thing)
genbankr documentation built on Nov. 8, 2020, 7:44 p.m.
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Description Usage Arguments Value Examples
Description
Create a TxDb object from a GenBankRecord.
Usage
1 2 3 4 5 6 7 | makeTxDbFromGenBank(gbr, reassign.ids = FALSE)
## S4 method for signature 'GenBankRecord'
makeTxDbFromGenBank(gbr, reassign.ids = FALSE)
## S4 method for signature 'GBAccession'
makeTxDbFromGenBank(gbr, reassign.ids = FALSE)
|
Arguments
gbr |
A GenBankRecord or GBAccession object |
reassign.ids |
logical. Passed down to |
Value
A TxDb object
Examples
1 2 | thing = readGenBank(system.file("unitTests/compjoin.gbk", package="genbankr"))
tx = makeTxDbFromGenBank(thing)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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