geneRecommender: A gene recommender algorithm to identify genes coexpressed with a query set of genes

This package contains a targeted clustering algorithm for the analysis of microarray data. The algorithm can aid in the discovery of new genes with similar functions to a given list of genes already known to have closely related functions.

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("geneRecommender")
AuthorGregory J. Hather <ghather@stat.berkeley.edu>, with contributions from Art B. Owen <art@stat.stanford.edu> and Terence P. Speed <terry@stat.berkeley.edu>
Bioconductor views Clustering Microarray
Date of publicationNone
MaintainerGreg Hather <ghather@stat.berkeley.edu>
LicenseGPL (>= 2)
Version1.48.0

View on Bioconductor

Files

DESCRIPTION
NAMESPACE
R
R/geneRecommender.R
build
build/vignette.rds
inst
inst/doc
inst/doc/geneRecommender.R
inst/doc/geneRecommender.Rnw
inst/doc/geneRecommender.pdf
man
man/gr.cv.Rd man/gr.main.Rd man/gr.normalize.Rd
vignettes
vignettes/geneRecommender.Rnw

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