geneRecommender: A gene recommender algorithm to identify genes coexpressed with a query set of genes

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This package contains a targeted clustering algorithm for the analysis of microarray data. The algorithm can aid in the discovery of new genes with similar functions to a given list of genes already known to have closely related functions.

Author
Gregory J. Hather <ghather@stat.berkeley.edu>, with contributions from Art B. Owen <art@stat.stanford.edu> and Terence P. Speed <terry@stat.berkeley.edu>
Date of publication
None
Maintainer
Greg Hather <ghather@stat.berkeley.edu>
License
GPL (>= 2)
Version
1.46.0

View on Bioconductor

Man pages

gr.cv
A function for cross validation
gr.main
A gene recommender algorithm to identify genes coexpressed...
gr.normalize
A function for normalization

Files in this package

geneRecommender/DESCRIPTION
geneRecommender/NAMESPACE
geneRecommender/R
geneRecommender/R/geneRecommender.R
geneRecommender/build
geneRecommender/build/vignette.rds
geneRecommender/inst
geneRecommender/inst/doc
geneRecommender/inst/doc/geneRecommender.R
geneRecommender/inst/doc/geneRecommender.Rnw
geneRecommender/inst/doc/geneRecommender.pdf
geneRecommender/man
geneRecommender/man/gr.cv.Rd
geneRecommender/man/gr.main.Rd
geneRecommender/man/gr.normalize.Rd
geneRecommender/vignettes
geneRecommender/vignettes/geneRecommender.Rnw