geneplotter: Graphics related functions for Bioconductor

Functions for plotting genomic data

AuthorR. Gentleman, Biocore
Date of publicationNone
MaintainerBioconductor Package Maintainer <maintainer@bioconductor.org>
LicenseArtistic-2.0
Version1.52.0

View on Bioconductor

Functions

alongChrom Man page
amplicon.plot Man page
buildACMainLabel Man page
cColor Man page
closeHtmlPage Man page
cPlot Man page
cScale Man page
cullACXPoints Man page
dChip.colors Man page
defMapFun Man page
dispACXaxis Man page
doACCumPlot Man page
doACImagePlot Man page
doACLocalPlot Man page
doACMatPlot Man page
emptyACPlot Man page
expressionSet133a Man page
fixACPhysPoints Man page
getACClosestPos Man page
getACDataEnv Man page
getACExprs Man page
getACGeneSyms Man page
getACPlotLabs Man page
getACStrandVals Man page
GetColor Man page
getPlotExpressionColors Man page
greenred.colors Man page
groupedHeatmap Man page
highlightACDups Man page
histStack Man page
imageMap Man page
imageMap,matrix,connection,list,character-method Man page
imageMap,matrix-method Man page
imageMap-methods Man page
IMCAEntrezLink Man page
limitACXRange Man page
make.chromOrd Man page
Makesense Man page
Makesense,ExpressionSet,character-method Man page
Makesense,ExpressionSet,missing-method Man page
Makesense,matrix,character-method Man page
multidensity Man page
multidensity.formula Man page
multidensity.list Man page
multidensity.matrix Man page
multiecdf Man page
multiecdf.formula Man page
multiecdf.list Man page
multiecdf.matrix Man page
openHtmlPage Man page
plotChr Man page
plotExpressionGraph Man page
plotMA Man page
plotMA,data.frame-method Man page
plotMA,ExonCountSet-method Man page
plotMA-methods Man page
saveeps Man page
savepdf Man page
savepng Man page
savetiff Man page
scaleACData Man page

Files

geneplotter/DESCRIPTION
geneplotter/NAMESPACE
geneplotter/R
geneplotter/R/Makesense.R geneplotter/R/alongChrom.R geneplotter/R/amplicon.plot.R geneplotter/R/cPlot.R geneplotter/R/cScale.R geneplotter/R/gplotter.R geneplotter/R/groupedHeatmap.R geneplotter/R/histStack.R geneplotter/R/imageMap.R geneplotter/R/multiecdf.R geneplotter/R/openHtmlPage.R geneplotter/R/plotChr.R geneplotter/R/plotExpression.R geneplotter/R/plotMA.R geneplotter/R/savepng.R geneplotter/R/zzz.R
geneplotter/README
geneplotter/build
geneplotter/build/vignette.rds
geneplotter/data
geneplotter/data/IMCAEntrezLink.R
geneplotter/data/expressionSet133a.rda
geneplotter/inst
geneplotter/inst/NEWS.Rd
geneplotter/inst/doc
geneplotter/inst/doc/byChroms.R
geneplotter/inst/doc/byChroms.Rnw
geneplotter/inst/doc/byChroms.pdf
geneplotter/inst/doc/visualize.R
geneplotter/inst/doc/visualize.Rnw
geneplotter/inst/doc/visualize.pdf
geneplotter/man
geneplotter/man/GetColor.Rd geneplotter/man/Makesense.Rd geneplotter/man/alongChrom.Rd geneplotter/man/amplicon.plot.Rd geneplotter/man/cColor.Rd geneplotter/man/cPlot.Rd geneplotter/man/cScale.Rd geneplotter/man/eset133a.Rd geneplotter/man/groupedHeatmap.Rd geneplotter/man/histStack.Rd geneplotter/man/imageMap.Rd geneplotter/man/make.chromOrd.Rd geneplotter/man/multiecdf.Rd geneplotter/man/openHtmlPage.Rd geneplotter/man/plotChr.Rd geneplotter/man/plotExpressionGraph.Rd geneplotter/man/plotMA.Rd geneplotter/man/savepng.Rd
geneplotter/vignettes
geneplotter/vignettes/byChroms.Rnw
geneplotter/vignettes/visualize.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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