msaplot: msaplot

Description Usage Arguments Value Author(s)

View source: R/msaplot.R

Description

multiple sequence alignment with phylogenetic tree

Usage

1
msaplot(p, fasta, offset = 0, width = 1, color = NULL, window = NULL)

Arguments

p

tree view

fasta

fasta file, multiple sequence alignment

offset

offset of MSA to tree

width

total width of alignment, compare to width of tree

color

color

window

specific a slice to display

Value

tree view

Author(s)

Guangchuang Yu


ggtree documentation built on Aug. 20, 2017, 2:01 a.m.