gmoviz: Seamless visualization of complex genomic variations in GMOs and edited cell lines

Genetically modified organisms (GMOs) and cell lines are widely used models in all kinds of biological research. As part of characterising these models, DNA sequencing technology and bioinformatics analyses are used systematically to study their genomes. Therefore, large volumes of data are generated and various algorithms are applied to analyse this data, which introduces a challenge on representing all findings in an informative and concise manner. `gmoviz` provides users with an easy way to visualise and facilitate the explanation of complex genomic editing events on a larger, biologically-relevant scale.

Package details

AuthorKathleen Zeglinski [cre, aut], Arthur Hsu [aut], Monther Alhamdoosh [aut] (<https://orcid.org/0000-0002-2411-1325>), Constantinos Koutsakis [aut]
Bioconductor views Coverage GeneticVariability GenomicVariation Sequencing Visualization
MaintainerKathleen Zeglinski <kathleen.zeglinski@csl.com.au>
LicenseGPL-3
Version1.2.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("gmoviz")

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gmoviz documentation built on Nov. 8, 2020, 5:41 p.m.