makeUCSCsession: Initiate UCSC genome browser session given the freeze...
In hiAnnotator: Functions for annotating GRanges objects
Description
Usage
Arguments
Value
See Also
Examples
Description
Initiate UCSC genome browser session given the freeze argument.
Usage
1
makeUCSCsession(freeze = "hg18")
Arguments
freeze
one of following: hg18, mm8, rheM, etc. Default is hg18.
Value
browser session object compatible with rtracklayer functions.
See Also
getUCSCtable, makeGRanges,
getNearestFeature, getSitesInFeature
Examples
1
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7
## Not run:
session <- makeUCSCsession()
genome(session)
session <- makeUCSCsession("mm8")
genome(session)
## End(Not run)
hiAnnotator documentation built on Nov. 8, 2020, 7:27 p.m.
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Description Usage Arguments Value See Also Examples
Description
Initiate UCSC genome browser session given the freeze argument.
Usage
1 | makeUCSCsession(freeze = "hg18")
|
Arguments
freeze |
one of following: hg18, mm8, rheM, etc. Default is hg18. |
Value
browser session object compatible with rtracklayer functions.
See Also
getUCSCtable, makeGRanges,
getNearestFeature, getSitesInFeature
Examples
1 2 3 4 5 6 7 | ## Not run:
session <- makeUCSCsession()
genome(session)
session <- makeUCSCsession("mm8")
genome(session)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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