Files in iGC
An integrated analysis package of Gene expression and Copy number alteration
NAMESPACE
DESCRIPTION
build/vignette.rds
data/hg19DBNM.rda
R/direct_gene_cna.R
R/iGC.R
R/data_hg19DBNM.R
R/find_cna_driven_gene.R
R/create_sample_desc.R
R/faster_gene_cna.R
R/create_gene_exp.R
vignettes/Introduction.Rmd
vignettes/pics/analysis_workflow.png
man/iGC.Rd
man/create_gene_cna.Rd
man/direct_gene_cna.Rd
man/create_gene_exp.Rd
man/create_sample_desc.Rd
man/hg19DBNM.Rd
man/find_cna_driven_gene.Rd
inst/NEWS.Rd
inst/CITATION
inst/doc/Introduction.R
inst/doc/Introduction.Rmd
inst/doc/Introduction.html
inst/extdata/sample_desc.csv
inst/extdata/GE/US82800149_251976012512_S01.tcga_level3.txt
inst/extdata/GE/US82800149_251976012261_S01.tcga_level3.txt
inst/extdata/GE/US82800149_251976012204_S01.tcga_level3.txt
inst/extdata/GE/US82800149_251976012510_S01.tcga_level3.txt
inst/extdata/GE/US82800149_251976012154_S01.tcga_level3.txt
inst/extdata/GE/US82800149_251976012205_S01.tcga_level3.txt
inst/extdata/GE/US82800149_251976012503_S01.tcga_level3.txt
inst/extdata/GE/US82800149_251976012264_S01.tcga_level3.txt
inst/extdata/GE/US82800149_251976012155_S01.tcga_level3.txt
inst/extdata/GE/US82800149_251976012200_S01.tcga_level3.txt
inst/extdata/GE/US82800149_251976012483_S01.tcga_level3.txt
inst/extdata/GE/US82800149_251976012504_S01.tcga_level3.txt
inst/extdata/GE/US82800149_251976012517_S01.tcga_level3.txt
inst/extdata/GE/US82800149_251976012487_S01.tcga_level3.txt
inst/extdata/GE/US82800149_251976012263_S01.tcga_level3.txt
inst/extdata/GE/US82800149_251976012210_S01.tcga_level3.txt
inst/extdata/CNA/B08_697166.hg19.txt
inst/extdata/CNA/C06_697142.hg19.txt
inst/extdata/CNA/A05_697032.hg19.txt
inst/extdata/CNA/C03_707088.hg19.txt
inst/extdata/CNA/C02_697152.hg19.txt
inst/extdata/CNA/C04_697074.hg19.txt
inst/extdata/CNA/B10_697116.hg19.txt
inst/extdata/CNA/B11_697062.hg19.txt
inst/extdata/CNA/B03_697186.hg19.txt
inst/extdata/CNA/B07_697190.hg19.txt
inst/extdata/CNA/A04_697150.hg19.txt
inst/extdata/CNA/B05_697036.hg19.txt
inst/extdata/CNA/A09_697146.hg19.txt
inst/extdata/CNA/C01_697154.hg19.txt
inst/extdata/CNA/B01_697160.hg19.txt
inst/extdata/CNA/A07_697200.hg19.txt
