SummarizedData: Summarized data

Description Usage Format Details See Also


RangedSummarizedExperiment object contains the probability data of the control and positive samples. It is the integration of SWRG0 and SWRG1. colData in SummarizedData contains a column 'Group' indicating normal(0) from malignant(1). In assay, column represents samples, row represents genome ranges related to a disease.






We identified 299 genomic regions related to the methylation status of a disease. Then, we sequenced the cfDNA of 44 subjects. 22 were malignant, while others were normal. We built a statistical model to compute the probability of the disease for each region and subject, and this dataframe contains the probabilities of 299 regions and 44 samples.

See Also

Other data: SWRG0, SWRG1

iteremoval documentation built on Nov. 8, 2020, 11:12 p.m.