SummarizedData: Summarized data
In iteremoval: Iteration removal method for feature selection
Description
Usage
Format
Details
See Also
Description
RangedSummarizedExperiment object contains the probability
data of the control and positive samples. It is the integration of
SWRG0 and SWRG1. colData in SummarizedData
contains a column 'Group' indicating normal(0) from malignant(1). In assay,
column represents samples,
row represents genome ranges related to a disease.
Usage
1
Format
RangedSummarizedExperiment.
Details
We identified 299 genomic regions related to the methylation status
of a disease. Then, we sequenced the cfDNA of 44 subjects. 22 were malignant,
while others were normal. We built a statistical model to compute the
probability of the disease for each region and subject, and this dataframe
contains the probabilities of 299 regions and 44 samples.
See Also
iteremoval documentation built on Nov. 8, 2020, 11:12 p.m.
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Description Usage Format Details See Also
Description
RangedSummarizedExperiment object contains the probability
data of the control and positive samples. It is the integration of
SWRG0 and SWRG1. colData in SummarizedData
contains a column 'Group' indicating normal(0) from malignant(1). In assay,
column represents samples,
row represents genome ranges related to a disease.
Usage
1 |
Format
RangedSummarizedExperiment.
Details
We identified 299 genomic regions related to the methylation status of a disease. Then, we sequenced the cfDNA of 44 subjects. 22 were malignant, while others were normal. We built a statistical model to compute the probability of the disease for each region and subject, and this dataframe contains the probabilities of 299 regions and 44 samples.
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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