feature_screen: Screening feature using prevalence

Description Usage Arguments Value Examples

View source: R/plots.R

Description

Return the screened feature names.

Usage

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feature_screen(features, prevalence)

Arguments

features

result of feature_prevalence(...)

prevalence

the prevalence cutoff of features. The features with prevalence less than prevalence are removed.

Value

Vector

Examples

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g1 <- SWRG1; g0 <- SWRG0

result.complex <- feature_removal(g1, g0,
    cutoff1=0.95, cutoff0=0.925,
    offset=c(0.5, 1, 2))

prevalence.result <- feature_prevalence(result.complex, 233, hist.plot=TRUE)

feature.list <- feature_screen(prevalence.result, 3)

iteremoval documentation built on Nov. 8, 2020, 11:12 p.m.