API for limmaGUI
GUI for limma Package With Two Color Microarrays
| Global functions | |
|---|---|
| .onAttach | Source code |
| AboutLimmaGUI | Man page Source code |
| AboutNormalization | Man page Source code |
| BChelp | Man page Source code |
| ChooseContrastsParameterization | Man page Source code |
| ChooseEbayesStatistic | Man page Source code |
| ChooseParameterization | Man page Source code |
| ChoosePlotSymbolByClicking | Man page Source code |
| ChooseSpotType | Man page Source code |
| ComputeContrasts | Man page Source code |
| ComputeLinearModelFit | Man page Source code |
| CopyGraph | Man page Source code |
| CreateNewParameterization | Man page Source code |
| CreateTreeAndList | Man page Source code |
| DeleteContrastsParameterization | Man page Source code |
| DeleteParameterization | Man page Source code |
| DupCorBoxPlot | Man page Source code |
| ExportAvalues | Man page Source code |
| ExportHTMLreport | Man page Source code |
| ExportMvalues | Man page Source code |
| ExportTopTable | Man page Source code |
| GetBackgroundCorrectionMethod | Man page Source code |
| GetBetweenArrayNormalizationMethod | Man page Source code |
| GetCoef | Man page Source code |
| GetComponentsToExportInHTMLreport | Man page Source code |
| GetContrastsParameterizationName | Man page Source code |
| GetContrastsParameterizationNames | Man page Source code |
| GetDEcutoff | Man page Source code |
| GetDesignOrContrasts | Man page Source code |
| GetGeneLabelsOptions | Man page Source code |
| GetGenePixFlagWeightings | Man page Source code |
| GetImageAnalysisColumnHeadings | Man page Source code |
| GetImageProcessingFileType | Man page Source code |
| GetJpegOrPngParams | Man page Source code |
| GetJpegOrPngX11Params | Man page Source code |
| GetLowessType | Man page Source code |
| GetNEWxlim | Man page Source code |
| GetNormexpOffsetValue | Man page Source code |
| GetNumParametersNoTargets | Man page Source code |
| GetPValueCutoff | Man page Source code |
| GetParameterNames | Man page Source code |
| GetParameterizationName | Man page Source code |
| GetParametersAndOrContrasts | Man page Source code |
| GetPlotLabels | Man page Source code |
| GetPlotSize | Man page Source code |
| GetPlotTitle | Man page Source code |
| GetRNATypesFrom.ContrastsFromDropDowns.String | Man page Source code |
| GetReducedDuplicateSpacing | Man page Source code |
| GetSlideNum | Man page Source code |
| GetSpotTypesForLinearModel | Man page Source code |
| GetSpotTypesIncludedNames | Man page Source code |
| GetWithinArrayNormalizationMethod | Man page Source code |
| GetWtAreaParams | Man page Source code |
| GetlimmaDataSetName | Man page Source code |
| GetlmFitMethod | Man page Source code |
| HTMLplotUsingFunction | Man page |
| HeatDiagramDialog | Man page Source code |
| HeatDiagramPlot | Man page Source code |
| HowManyDups | Man page Source code |
| ImageArrayPlot | Man page Source code |
| ImageArrayPlotDialog | Man page Source code |
| ImportMA | Man page Source code |
| ImportMADialog | Man page Source code |
| InitNewParameterization | Man page Source code |
| LGchangeLog | Man page Source code |
| LogOddsPlot | Man page Source code |
| MAPlot | Man page Source code |
| MAPlotAvg | Man page Source code |
| MBoxPlot | Man page Source code |
| MMPlot | Man page Source code |
| NewLimmaFile | Man page Source code |
| NormalizeNow | Man page Source code |
| OpenALimmaFile | Man page Source code |
| OpenGALFile | Man page Source code |
| OpenGALandTargetsandSpotTypesfiles | Man page Source code |
| OpenLimmaFile | Man page Source code |
| OpenSpotTypesFile | Man page Source code |
| OpenTargetsFile | Man page Source code |
| PlotOptions | Man page Source code |
| PrintTipGroupMAPlot | Man page Source code |
| QQTplot | Man page Source code |
| ReadImageProcessingFiles | Man page Source code |
| Require | Man page Source code |
| Resize | Man page Source code |
| SaveAsLimmaFile | Man page Source code |
| SaveGraphAsJpeg | Man page Source code |
| SaveGraphAsPDF | Man page Source code |
| SaveGraphAsPNG | Man page Source code |
| SaveGraphAsPostscript | Man page Source code |
| SaveLimmaFile | Man page Source code |
| SelectPlotSymbols | Man page Source code |
| SetLayoutParameters | Man page Source code |
| SetWD | Man page Source code |
| SetupPlotKeyBindings | Man page Source code |
| SetupPlotMenus | Man page Source code |
| SimplifyContrastsExpression | Man page Source code |
| TclRequire | Man page Source code |
| Try | Man page Source code |
| TryReadImgProcFile | Man page Source code |
| UpDownOrBoth | Man page Source code |
| UpdateSpotTypesStatus | Man page Source code |
| VennDiagramPlot | Man page Source code |
| ViewDesignOrContrastsMatrixAsPairs | Man page Source code |
| ViewDesignOrContrastsMatrixInTable | Man page Source code |
| ViewExistingContrastsParameterization | Man page Source code |
| ViewExistingParameterization | Man page Source code |
| ViewRNATargets | Man page Source code |
| ViewSpotTypes | Man page Source code |
| WithinBetweenOrBoth | Man page Source code |
| chooseDir | Man page Source code |
| deleteItemFromList | Man page Source code |
| ebayesBoxPlots | Man page Source code |
| evalRcode | Man page Source code |
| fixSeps | Man page Source code |
| getPackageVersion | Man page Source code |
| imageplotlimmaGUI | Man page Source code |
| initGlobals | Man page Source code |
| limmaGUI | Man page Source code |
| limmaGUIhelp | Man page Source code |
| limmaHelp | Man page Source code |
| lmFitMethodHelp | Man page Source code |
| nstrstr | Man page Source code |
| onDestroy | Man page Source code |
| onExit | Man page Source code |
| plotMAColorCoded | Man page Source code |
| read.marrayTools | Man page Source code |
| readGALlimmaGUI | Man page |
| showChangeLog | Man page Source code |
| showCitations | Man page Source code |
| showGAL | Man page Source code |
| showTopTable | Man page Source code |
| strstr | Man page Source code |
| tclArrayVar | Man page Source code |
| vennDiagramlimmaGUI | Man page Source code |
| wtflags2 | Man page Source code |
