loci2path: Loci2path: regulatory annotation of genomic intervals based on tissue-specific expression QTLs

loci2path performs statistics-rigorous enrichment analysis of eQTLs in genomic regions of interest. Using eQTL collections provided by the Genotype-Tissue Expression (GTEx) project and pathway collections from MSigDB.

Package details

AuthorTianlei Xu
Bioconductor views BioCarta Coverage FunctionalGenomics GeneExpression GeneSetEnrichment Genetics Sequencing Software
MaintainerTianlei Xu <tianlei.xu@emory.edu>
URL https://github.com/StanleyXu/loci2path
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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loci2path documentation built on Nov. 8, 2020, 6:08 p.m.