Marr-class: the Marr class

In marr: Maximum rank reproducibility

Description

Objects of this class store needed information to work with a Marr object

Value

MarrSamplepairs returns the distribution of percent reproducible features (column-wise) per sample pair, MarrFeatures returns the distribution of percent reproducible sample pairs (row-wise) per feature, MarrSamplepairsfiltered returns the percent of reproducible features based on a threshold value and MarrFeaturesfiltered returns the percent of reproducible sample pairs based on a threshold value

Slots

MarrSamplepairs

Marr sample pairs

MarrFeatures

Marr features

MarrSamplepairsfiltered

Marr sample pairs post filtering

MarrFeaturesfiltered

Marr metabolites post filtering

Examples

data <- matrix(rnorm(2400), nrow=200, ncol=12)
data_Marr <- Marr(object = data, pSamplepairs=0.75,
                  pFeatures=0.75, alpha=0.05)

marr documentation built on March 10, 2021, 2 a.m.