metabCombiner-class: 'metabCombiner' Combined Metabolomics Dataset Class

In metabCombiner: Method for Combining LC-MS Metabolomics Feature Measurements

Description

This is the main object for the metabCombiner package workflow. This object holds a combined feature table, along with a retention time projection model, the ordered pair anchors used to generate this model, and key object statistics.

Slots

combinedTable

data.frame displaying all feature pair alignments, combining measurements of all possible shared compounds

nonmatched

list of data frames consisting of nonmatched features

anchors

data.frame of of feature alignments used for rt modeling

model

list containing the last fitted nonlinear model(s)

coefficients

list of last used A,B,C similarity weight values

samples

list of sample name vectors from input datasets

extra

list of extra column name vectors from input datasets

stats

set of useful metabCombiner statistics

metabCombiner documentation built on Dec. 10, 2020, 2 a.m.