Man pages for muscat
Multi-sample multi-group scRNA-seq data analysis tools

aggregateDataAggregation of single-cell to pseudobulk data
calcExprFreqscalcExprFreqs
dataExample datasets
mmDSDS analysis using mixed-models (MM)
pbDSpseudobulk DS analysis
pbHeatmapHeatmap of cluster-sample pseudobulks
pbMDSPseudobulk-level MDS plot
prepSCEPrepare SCE for DS analysis
prepSimSCE preparation for 'simData'
resDSresDS Formatting of DS analysis results
simDatasimData
muscat documentation built on Oct. 31, 2019, 10:39 a.m.