API for mzID
An mzIdentML parser for R

Global functions
[,mzIDCollection,character,missing,missing-method Man page
[,mzIDCollection,logical,missing,missing-method Man page
[,mzIDCollection,numeric,missing,missing-method Man page
[[,mzIDCollection,character,missing-method Man page
[[,mzIDCollection,numeric,missing-method Man page
as.list.mzIDCollection Man page Source code
attrExtract Source code
attrExtractNameValuePair Source code
c,mzID-method Man page
c,mzIDCollection-method Man page
colNamesToLower Source code
countChildren Source code
database,mzID-method Man page
database,mzIDCollection-method Man page
database,mzIDdatabase-method Man page
evidence Man page
evidence,mzID-method Man page
evidence,mzIDCollection-method Man page
evidence,mzIDevidence-method Man page
files Man page
files,mzID-method Man page
files,mzIDCollection-method Man page
files,mzIDparameters-method Man page
flatten Man page
flatten,mzID-method Man page
flatten,mzIDCollection-method Man page
flatten,mzIDpeptides-method Man page
flatten,mzIDpsm-method Man page
getAdditionalPar Source code
getDatabaseFile Source code
getDatabaseFilter Source code
getDatabaseTranslation Source code
getEnzymes Source code
getFragmentTolerance Source code
getMassTable Source code
getModifications Source code
getParentTolerance Source code
getPath Source code
getRawFile Source code
getSearchType Source code
getSoftware Source code
getThreshold Source code
getVersion Source code
id Man page
id,mzID-method Man page
id,mzIDCollection-method Man page
id,mzIDpsm-method Man page
idScanMap Man page
idScanMap,mzID-method Man page
idScanMap,mzIDCollection-method Man page
idScanMap,mzIDpsm-method Man page
increment Man page
increment,mzIDCollection-method Man page
isRemote Source code
keyFor Man page
keyFor,mzIDCollection,character-method Man page
length,mzID-method Man page
length,mzIDCollection-method Man page
length,mzIDdatabase-method Man page
length,mzIDevidence-method Man page
length,mzIDparameters-method Man page
length,mzIDpeptides-method Man page
length,mzIDpsm-method Man page
modifications,mzID-method Man page
modifications,mzIDCollection-method Man page
modifications,mzIDpeptides-method Man page
mzID Man page Source code
mzID-class Man page
mzID-getters Man page
mzID-package Man page
mzIDCollection Man page Source code
mzIDCollection-class Man page
mzIDdatabase Man page Source code
mzIDdatabase-class Man page
mzIDevidence Man page Source code
mzIDevidence-class Man page
mzIDparameters Man page Source code
mzIDparameters-class Man page
mzIDpeptides Man page Source code
mzIDpeptides-class Man page
mzIDpsm Man page Source code
mzIDpsm-class Man page
names,mzIDCollection-method Man page
names<-,mzIDCollection,character-method Man page
parameters Man page
parameters,mzID-method Man page
parameters,mzIDCollection-method Man page
parameters,mzIDparameters-method Man page
peptides,mzID-method Man page
peptides,mzIDCollection-method Man page
peptides,mzIDpeptides-method Man page
prepareXML Source code
removeDecoy Man page
removeDecoy,mzID-method Man page
removeDecoy,mzIDCollection-method Man page
safeCol Source code
scans,mzID-method Man page
scans,mzIDCollection-method Man page
scans,mzIDpsm-method Man page
show,mzID-method Man page
show,mzIDCollection-method Man page
show,mzIDdatabase-method Man page
show,mzIDevidence-method Man page
show,mzIDparameters-method Man page
show,mzIDpeptides-method Man page
show,mzIDpsm-method Man page
software Man page
software,mzID-method Man page
software,mzIDCollection-method Man page
software,mzIDparameters-method Man page
subsetWithMapping Source code
type.convert Source code
mzID documentation built on Nov. 17, 2017, 12:21 p.m.