API for ncGTW
Alignment of LC-MS Profiles by Neighbor-wise Compound-specific Graphical Time Warping with Misalignment Detection
| Global functions | |
|---|---|
| adjustRT | Man page Source code |
| alignData | Man page |
| alignData,ncGTWoutput-method | Man page |
| betEdge | Source code |
| buildGTWgraph | Source code |
| buildMultiParaValidmap | Source code |
| buildPairTemplate | Source code |
| chooseSmo | Source code |
| compCV | Man page Source code |
| downSample | Man page |
| downSample,ncGTWoutput-method | Man page |
| exclusiveGroups | Source code |
| fillPeaksChromPar | Man page Source code |
| findUniPeak | Source code |
| gaussFilter | Source code |
| getDistMat | Source code |
| getPeaksncGTW | Man page Source code |
| graphCut | Source code |
| groupInfo | Man page |
| groupInfo,ncGTWinput-method | Man page |
| gtwCut | Source code |
| initGtwParam | Source code |
| initHidparam | Source code |
| label2path | Source code |
| loadEic | Source code |
| loadProfile | Man page Source code |
| meanCorOl | Man page Source code |
| misalignDetect | Man page Source code |
| ncGTW | Man page |
| ncGTW-package | Man page |
| ncGTW1stLayer | Source code |
| ncGTWalign | Man page Source code |
| ncGTWalignSmo | Source code |
| ncGTWinput | Man page |
| ncGTWinput-class | Man page |
| ncGTWoutput | Man page |
| ncGTWoutput-class | Man page |
| ncGTWparam | Man page |
| ncGTWparam-class | Man page |
| ncGTWpath | Man page |
| ncGTWpath,ncGTWoutput-method | Man page |
| ncGTWpeaks | Man page |
| ncGTWpeaks,ncGTWwarp-method | Man page |
| ncGTWsplit | Source code |
| ncGTWwarp | Man page |
| ncGTWwarp-class | Man page |
| pathCombine | Source code |
| peakGroupPval | Source code |
| peakGroupPvalOrder | Source code |
| plotGroup | Man page Source code |
| profiles | Man page |
| profiles,ncGTWinput-method | Man page |
| rt2scan | Source code |
| rtRaw | Man page |
| rtRaw,ncGTWinput-method | Man page |
| rtncGTW | Man page |
| rtncGTW,ncGTWwarp-method | Man page |
| scanRange | Man page |
| scanRange,ncGTWoutput-method | Man page |
| smoTest | Source code |
| splitGroupPval | Source code |
| valid_ncGTWinput | Source code |
| valid_ncGTWoutput | Source code |
| valid_ncGTWwarp | Source code |
| warpCurve | Source code |
| xcmsExamples | Man page |
