Description Usage Arguments Value
This function takes the output of screen_cv.glasso
or
mixglasso
and creates a network plot using the network library.
1 2 3 4 5 6 |
x |
A network clustering object as returned by
|
node.names |
Names for the nodes in the network. If NULL, names from net.clustering will be used. |
group.names |
Names for the clusters or groups. If NULL, names from net.clustering will be used (by default these are integets 1:numClusters). |
p.corrs.thresh |
Threshold applied to the absolute partial correlations. Edges that are below the threshold in all of the groups are not displayed. |
print.pdf |
If TRUE, save the output as a PDF file. |
pdf.filename |
If |
... |
Further arguments |
Returns NULL and prints out the networks (or saves them to pdf if
print.pdf
is TRUE. The networks are displayed as a series of nComps+1
plots, where in the first plot edge widths are shown according to
the maximum partial correlation of the edge over all groups. The following plots
show the edges for each group. Positive partial correlation edges are shown in
black, negative ones in blue. If an edge is below the threshold on the absolute
partial correlation, it is displayed in gray or light blue respectively.
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