Description Usage Arguments Value Author(s) Examples
View source: R/nucleoSimFunctions.R
Generate a graph for
a list marked as an syntheticNucMap
class
1 2 |
x |
a list marked as an |
... |
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a graph of a synthetic nucleosome map
Astrid Deschenes, Rawane Samb
1 2 3 4 5 6 7 8 9 10 | ## Generate a synthetic map with 20 well-positioned nucleosomes, 5 fuzzy
## nucleosomes and 10 deleted nucleosomes using a Student distribution
## with a variance of 10 for the well-positioned nucleosomes,
## a variance of 20 for the fuzzy nucleosomes and a seed of 15
syntheticMap <- syntheticNucMapFromDist(wp.num = 30, wp.del = 10,
wp.var = 10, fuz.num = 5, fuz.var = 20, rnd.seed = 15,
distr = "Student")
## Create graph using the synthetic map
plot(syntheticMap, xlab="Position", ylab="Coverage")
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