nucleoSim: Generate synthetic nucleosome maps

This package can generate a synthetic map with reads covering the nucleosome regions as well as a synthetic map with forward and reverse reads emulating next-generation sequencing. The user has choice between three different distributions for the read positioning: Normal, Student and Uniform.

Package details

AuthorRawane Samb [aut], Astrid DeschĂȘnes [cre, aut], Pascal Belleau [aut], Arnaud Droit [aut]
Bioconductor views Alignment Genetics Sequencing Software StatisticalMethod
MaintainerAstrid Deschenes <adeschen@hotmail.com>
LicenseArtistic-2.0
Version1.16.0
URL https://github.com/arnauddroitlab/nucleoSim
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("nucleoSim")

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nucleoSim documentation built on April 29, 2020, 2:33 a.m.