Man pages for pathprint
Pathway fingerprinting for analysis of gene expression arrays
| consensusDistance | Calculate a distribution of distances from a consensus... |
| consensusFingerprint | Construct a consensus fingerprint |
| customCDFAnn | Map probes to Entrez Gene IDs |
| diffPathways | Detect differentially activated pathways between fingerprints |
| exprs2fingerprint | Create a pathway fingerprint from a gene expression table. |
| genesets | Names of genesets used in pathprint |
| pathprint.Ce.gs | Pathprint genesets - C. elegans |
| pathprint.Dm.gs | Pathprint genesets - D. melanogaster |
| pathprint.Dr.gs | Pathprint genesets - D. rerio |
| pathprint.Hs.gs | Pathprint genesets - H. sapiens |
| pathprint.Mm.gs | Pathprint genesets - M. musculus |
| pathprint-package | Pathway fingerprinting for analysis of gene expression arrays |
| pathprint.Rn.gs | Pathprint genesets - R. norvegicus |
| platform.thresholds | Pathway fingerprint threshold values |
| pluripotents.frame | Manually curated list of pluripotent arrays |
| single.chip.enrichment | Calculate enrichment of a list of genesets in an array |
| thresholdFingerprint | Apply threshold values to produce a Pathway Fingerprint |
