pathprint: Pathway fingerprinting for analysis of gene expression arrays

Algorithms to convert a gene expression array provided as an expression table or a GEO reference to a 'pathway fingerprint', a vector of discrete ternary scores representing high (1), low(-1) or insignificant (0) expression in a suite of pathways.

Package details

AuthorGabriel Altschuler, Sokratis Kariotis
Bioconductor views GeneExpression KEGG Reactome Transcription
MaintainerSokratis Kariotis <s.kariotis@sheffield.ac.uk>
LicenseGPL
Version1.17.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("pathprint")

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pathprint documentation built on April 28, 2020, 7:54 p.m.