peakPantheR: Peak Picking and Annotation of High Resolution Experiments

An automated pipeline for the detection, integration and reporting of predefined features across a large number of mass spectrometry data files. It enables the real time annotation of multiple compounds in a single file, or the parallel annotation of multiple compounds in multiple files. A graphical user interface as well as command line functions will assist in assessing the quality of annotation and update fitting parameters until a satisfactory result is obtained.

Package details

AuthorArnaud Wolfer [aut, cre] (<>), Goncalo Correia [aut] (<>), Jake Pearce [ctb], Caroline Sands [ctb]
Bioconductor views MassSpectrometry Metabolomics PeakDetection
MaintainerArnaud Wolfer <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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peakPantheR documentation built on Nov. 8, 2020, 6:38 p.m.