setGenome: Configure genome for all steps
In pipeFrame: Pipeline framework for bioinformatics in R
Description
Usage
Arguments
Value
Examples
Description
Configure the reference genome assembly for all steps.
Usage
1
2
3
4
5
getValidGenome()
setGenome(genome)
getGenome()
Arguments
genome
Character scalar. Valid genome to be configured.
Value
getValidGenome
Character scalar.
All valid genome assemblies for this package.
setGenome
All packages and dependencies are
configured and installed. No value will be returned.
getGenome
Character scalar.
Display the configured genome.
Examples
1
2
3
getValidGenome()
setGenome("hg19")
getGenome()
pipeFrame documentation built on Nov. 8, 2020, 5:51 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
Configure the reference genome assembly for all steps.
Usage
1 2 3 4 5 | getValidGenome()
setGenome(genome)
getGenome()
|
Arguments
genome |
|
Value
getValidGenome |
|
setGenome |
All packages and dependencies are configured and installed. No value will be returned. |
getGenome |
|
Examples
1 2 3 | getValidGenome()
setGenome("hg19")
getGenome()
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.