setRefDir: Set the reference directory

In pipeFrame: Pipeline framework for bioinformatics in R

Description

Set the reference directory

Usage

setRefDir(refdir, createDir = TRUE)

getRefDir()

getRef(refName)

getRefFiles(refName)

getRefRc(refName)

Arguments

refdir	Character scalar. The directory to store the reference data.
createDir	Logica scalar. Create the directory if the directory does not exist. Default: TRUE
refName	Character scalar. The name of reference data.

Value

setRefDir	No value will be returned
getRefDir	Character scalar. Display the directory of reference data.
getRef	List scalar. A list object which contains "files" (reference file paths) and "rc" (reference R object)
getRefFiles	Character scalar or vector. Display the reference file directory.
getRefRc	Uncertain scalar or vector. Display any reference R object.

Examples

setRefDir("./refdir")
getRefDir()
getRef("test")

getRefFiles("test")
getRefRc("test")

pipeFrame documentation built on Nov. 8, 2020, 5:51 p.m.