Man pages for prada
Data analysis for cell-based functional assays
| analysePlate | Apply a statistic to the data from each well in a plate |
| as.all | Coercion without introduction of NAs |
| barploterrbar | Barplot with error bars. |
| combineFrames | Combine the cytoFrames within a cytoSet according to some... |
| csApply | Apply a function over the intensities in a cytoSet |
| cytoFrame-class | 'cytoFrame': a class for storing observed quantitative... |
| cytoSet-class | 'cytoSet': a class for storing raw data from a quantitative... |
| data-cytoFrame | A sample cytoFrame object - German Cancer Research Center... |
| data-cytoSet | A sample cytoSet object - German Cancer Research Center... |
| devDims | Device Dimensions for plate plots |
| devRes | Resolution of current plotting device |
| fitNorm2 | Fit bivariate normal distribution. |
| gate-class | 'gate': a class for subsetting flow-cytometry data by... |
| gateSet-class | 'gateSet': a class for subsetting flow-cytometry data by... |
| getAlphaNumeric | Convert from plate coordinates to alphanumeric notation. |
| getPradaPar | Set and query global parameters for functions in the prada... |
| new-internal | Internal functions called by other gating functions |
| plotNorm2 | Plot fitted bivariate normal distribution. |
| plotPlate | Plot a well statistic for microtiter plates. |
| readCytoSet | Create a cytoSet object from one or more FCS 3.0 files |
| readFCS | Read an FCS file |
| readFCSaux | Auxiliary functions for readFCS |
| removeCensored | Remove rows that contain censored data |
| tcltkProgress | A simple tcltk progress window |
| threePanelPlot | Visualize cytometry data |
| thresholds | Discretize a two-dimensional data space into quadrants by... |
| touchFCS | Check for FCS files |
| vpLocation | Absolute location of current viewport |
