primirTSS: primirTSS: Search for putative TSSs of miRNA
In primirTSS: Prediction of pri-miRNA Transcription Start Site
Description
Detail
Author(s)
See Also
Description
A fast, convenient tool to identify the TSSs of miRNAs
by integrating the data of H3K4me3 and Pol II as well as
combining the conservation level and sequence feature,
provided within both command-line and graphical interfaces,
which achieves a better performance than
the previous non-cell-specific methods on miRNA TSSs.
Detail
See find_tss for deailted instruction
to predict TSSs of miRNA;
See run_primirTSSapp
to predict TSSs of miRNA using graphical web interface.
Author(s)
Maintainer: Pumin Li ipumin@163.com
Other contributors: Qi Xu xuqi@vip.qq.com
See Also
Useful links:
Xu HUA et al
primirTSS documentation built on Nov. 8, 2020, 7:11 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Detail Author(s) See Also
Description
A fast, convenient tool to identify the TSSs of miRNAs by integrating the data of H3K4me3 and Pol II as well as combining the conservation level and sequence feature, provided within both command-line and graphical interfaces, which achieves a better performance than the previous non-cell-specific methods on miRNA TSSs.
Detail
See find_tss for deailted instruction
to predict TSSs of miRNA;
See run_primirTSSapp
to predict TSSs of miRNA using graphical web interface.
Author(s)
Maintainer: Pumin Li ipumin@163.com
Other contributors: Qi Xu xuqi@vip.qq.com
See Also
Useful links: Xu HUA et al
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.