proBAMr: Generating SAM file for PSMs in shotgun proteomics data

Mapping PSMs back to genome. The package builds SAM file from shotgun proteomics data The package also provides function to prepare annotation from GTF file.

Package details

AuthorXiaojing Wang
Bioconductor views ImmunoOncology MassSpectrometry Proteomics Software Visualization
MaintainerXiaojing Wang <xiaojing.wang@vanderbilt.edu>
LicenseArtistic-2.0
Version1.24.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("proBAMr")

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proBAMr documentation built on Nov. 8, 2020, 8:05 p.m.