Files in proBAMr
Generating SAM file for PSMs in shotgun proteomics data
NEWS
NAMESPACE
DESCRIPTION
build/vignette.rds
R/PSMtab2SAM.R
R/PrepareAnnotationGENCODE.R
vignettes/Fig1.jpg
vignettes/Tab3.jpg
vignettes/Tab1.jpg
vignettes/proBAMr.Rnw
vignettes/Tab2.jpg
man/PrepareAnnotationGENCODE.Rd
man/PSMtab2SAM.Rd
tests/runTests.R
inst/doc/proBAMr.R
inst/doc/proBAMr.pdf
inst/doc/proBAMr.Rnw
inst/extdata/coding_seq.fasta
inst/extdata/test.gtf
inst/extdata/passedPSM.tab
inst/extdata/pro_seq.fasta
inst/extdata/header
inst/extdata/GENCODE/exon_anno.RData
inst/extdata/GENCODE/txdb.sqlite
inst/extdata/GENCODE/ids.RData
inst/extdata/GENCODE/proseq.RData
inst/extdata/GENCODE/procodingseq.RData
inst/extdata/res/test.sam
inst/extdata/res/test_header.bam
inst/extdata/res/test_header_sort.bam
inst/extdata/res/test_header_sort.bam.bai
inst/extdata/res/SAM.RData
inst/extdata/res/test_header.sam
inst/unitTests/test_PSMtab2SAM.R
inst/unitTests/test_PrepareAnnotationGENCODE.R
