as_profileplyr: Import ChIPprofile object to profileplyr
In profileplyr: Visualization and annotation of read signal over genomic ranges with profileplyr
Description
Usage
Arguments
Value
Examples
Description
Function to convert soGGi ChIPprofile objects to profileplyr object .
Usage
1
as_profileplyr(chipProfile, names = NULL)
Arguments
chipProfile
A ChIPprofile object as created by soGGi regionPlot() function.
names
Column to select row IDs/names from ChIPprofile mcols.
Value
A profileplyr object
Examples
1
2
3
4
library(soGGi)
data("ik_Profiles")
proplyr <- as_profileplyr(ik_Profiles,names="ID")
export_deepToolsMat(proplyr,con=file.path(tempdir(),"ik_Profiles.MAT"))
profileplyr documentation built on Nov. 8, 2020, 8:12 p.m.
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Description Usage Arguments Value Examples
Description
Function to convert soGGi ChIPprofile objects to profileplyr object .
Usage
1 | as_profileplyr(chipProfile, names = NULL)
|
Arguments
chipProfile |
A ChIPprofile object as created by soGGi regionPlot() function. |
names |
Column to select row IDs/names from ChIPprofile mcols. |
Value
A profileplyr object
Examples
1 2 3 4 | library(soGGi)
data("ik_Profiles")
proplyr <- as_profileplyr(ik_Profiles,names="ID")
export_deepToolsMat(proplyr,con=file.path(tempdir(),"ik_Profiles.MAT"))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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