testSurvivalCutoff: Test the survival difference between two survival groups...

In psichomics: Graphical Interface for Alternative Splicing Quantification, Analysis and Visualisation

Description

Test the survival difference between two survival groups given a cutoff

Usage

testSurvivalCutoff(
  cutoff,
  data,
  filter = TRUE,
  clinical,
  ...,
  session = NULL,
  survivalInfo = FALSE
)

Arguments

cutoff	Numeric: Cutoff of interest
data	Numeric: elements of interest to test against the cutoff
filter	Boolean or numeric: elements to use (all are used by default)
clinical	Data frame: clinical data
...	Arguments passed on to processSurvTerms censoring Character: censor using left, right, interval or interval2 scale Character: rescale the survival time to days, weeks, months or years formulaStr Character: formula to use coxph Boolean: fit a Cox proportional hazards regression model? survTime survTime object: times to follow up, time start, time stop and event (optional) event Character: name of column containing time of the event of interest timeStart Character: name of column containing starting time of the interval or follow up time timeStop Character: name of column containing ending time of the interval (only relevant for interval censoring) followup Character: name of column containing follow up time
session	Shiny session
survivalInfo	Boolean: return extra survival information

Value

p-value of the survival difference

psichomics documentation built on Nov. 8, 2020, 5:44 p.m.