quantro: A test for when to use quantile normalization

A data-driven test for the assumptions of quantile normalization using raw data such as objects that inherit eSets (e.g. ExpressionSet, MethylSet). Group level information about each sample (such as Tumor / Normal status) must also be provided because the test assesses if there are global differences in the distributions between the user-defined groups.

Package details

AuthorStephanie Hicks and Rafael Irizarry
Bioconductor views Microarray MultipleComparison Normalization Preprocessing Sequencing
MaintainerStephanie Hicks <[email protected]>
LicenseGPL (>=3)
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:

Try the quantro package in your browser

Any scripts or data that you put into this service are public.

quantro documentation built on Nov. 1, 2018, 3:54 a.m.