availableOntologies-GreatJob-method: All available ontology names
In rGREAT: Client for GREAT Analysis

Description Usage Arguments Details Value Author(s) Examples

All available ontology names

1 2	## S4 method for signature 'GreatJob' availableOntologies(job, category = NULL)

`job`	a `GreatJob-class` instance
`category`	one or multiple categories. All available categories can be get by `availableCategories`

The values of the supported ontologies sometime change. You should run the function to get the real-time values. The meaning of ontology returned is quite self-explained by the name.

The returned values is a vector of ontologies.

Zuguang gu <z.gu@dkfz.de>

# note the `job` was generated from GREAT 3.0.0
job = readRDS(system.file("extdata", "job.rds", package = "rGREAT"))
availableOntologies(job)
availableOntologies(job, category = "Pathway Data")