rTANDEM: Interfaces the tandem protein identification algorithm in R
Version 1.16.0

This package interfaces the tandem protein identification algorithm in R. Identification can be launched in the X!Tandem style, by using as sole parameter the path to a parameter file. But rTANDEM aslo provides extended syntax and functions to streamline launching analyses, as well as function to convert results, parameters and taxonomy to/from R. A related package, shinyTANDEM, provides visualization interface for result objects.

Package details

AuthorFrederic Fournier <frederic.fournier@crchuq.ulaval.ca>, Charles Joly Beauparlant <charles.joly-beauparlant@crchul.ulaval.ca>, Rene Paradis <rene.paradis@genome.ulaval.ca>, Arnaud Droit <arnaud.droit@crchuq.ulaval.ca>
Bioconductor views MassSpectrometry Proteomics
MaintainerFrederic Fournier <frederic.fournier@crchuq.ulaval.ca>
LicenseArtistic-1.0 | file LICENSE
Version1.16.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("rTANDEM")

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rTANDEM documentation built on May 31, 2017, 3:25 p.m.