Files in rTANDEM

Interfaces the tandem protein identification algorithm in R

NEWS

NAMESPACE

DESCRIPTION

README

LICENSE

build/vignette.rds

src/mscore.h

src/mscore_tandem.h

src/mscore_k.h

src/mrefine.h

src/saxhandler.h

src/saxbiomlhandler.cpp

src/mpmods.cpp

src/msequencecollection.cpp

src/mcleave.h

src/mreport.h

src/loadmspectrum.cpp

src/msequtilities.cpp

src/saxgamlhandler.cpp

src/msemistate.h

src/resource.h

src/mscore_hrk.h

src/masscalc.cpp

src/saxmzdatahandler.cpp

src/saxtaxhandler.cpp

src/mscore_tandem.cpp

src/stdafx.cpp

src/saxmzxmlhandler.cpp

src/msequence.h

src/msequenceserver.h

src/mdomains.h

src/xmlparameter.cpp

src/saxsaphandler.h

src/mbiomlreport.cpp

src/mscore.cpp

src/mscorepam.h

src/saxmodhandler.cpp

src/Makevars.win

src/mxxcleavage.cpp

src/mscorestate.h

src/expat.h

src/tandem.cpp

src/saxgamlhandler.h

src/msequencecollection.h

src/dataLoader.h

src/base64.cpp

src/saxmzmlhandler.h

src/loadmspectrum.h

src/Makevars.in

src/saxbiomlhandler.h

src/saxmodhandler.h

src/saxtandeminputhandler.h

src/expat_old.h

src/mspectrumcondition.h

src/mtermmods.cpp

src/stdafx.h

src/mpmods.h

src/PTMTreeSearch.h

src/mplugin.cpp

src/saxmzxmlhandler.h

src/mrefine.cpp

src/mspectrumcondition.cpp

src/mhistogram.h

src/xmltaxonomy.cpp

src/Makevars

src/mplugin.h

src/PTMTreeSearchScore.h

src/mbiomlreport.h

src/dataLoader.cpp

src/mmotif.h

src/mscore_k.cpp

src/saxmzdatahandler.h

src/base64.h

src/msequtilities.h

src/PTMTreeSearchScore.cpp

src/expat_external.h

src/mpam.cpp

src/xmltaxonomy.h

src/mtermmods.h

src/mspectrum.h

src/mpam.h

src/saxmzmlhandler.cpp

src/mreport.cpp

src/mxxcleavage.h

src/saxsaphandler.cpp

src/stack_ptmtreesearch.h

src/saxtandeminputhandler.cpp

src/xmlparameter.h

src/masscalc.h

src/tandem.h

src/mprocess.h

src/saxhandler.cpp

src/expat_external_old.h

src/saxtaxhandler.h

src/mscore_hrk.cpp

src/msequenceserver.cpp

src/mprocess.cpp

src/PTMTreeSearch.cpp

R/accessors.R R/parameters.R R/visualizers.R R/rTANDEM.R R/converters.R R/results.R

vignettes/rTANDEM.Rnw

man/tandem.Rd man/visualizers.Rd man/converters.Rd man/rTResult-class.Rd man/rTANDEM-package.Rd man/accessors.Rd man/parameters.Rd inst/doc/rTANDEM.pdf

inst/doc/rTANDEM.Rnw

inst/doc/rTANDEM.R

inst/extdata/tandem-style.css

inst/extdata/default_input.xml

inst/extdata/ptmlist.txt

inst/extdata/taxonomy.xml

inst/extdata/test_spectra.mgf

inst/extdata/tandem-input-style.xsl

inst/extdata/result.xml

inst/extdata/tandem-style.xsl

inst/extdata/input.xml

inst/extdata/fasta/scd.fasta.pro

rTANDEM documentation built on April 28, 2020, 7:04 p.m.