Files in rTANDEM
Interfaces the tandem protein identification algorithm in R

NEWS
README
LICENSE
DESCRIPTION
NAMESPACE
inst/doc/rTANDEM.R inst/doc/rTANDEM.pdf
inst/doc/rTANDEM.Rnw
inst/extdata/taxonomy.xml
inst/extdata/input.xml
inst/extdata/ptmlist.txt
inst/extdata/tandem-style.xsl
inst/extdata/default_input.xml
inst/extdata/tandem-input-style.xsl
inst/extdata/result.xml
inst/extdata/test_spectra.mgf
inst/extdata/tandem-style.css
inst/extdata/fasta/scd.fasta.pro
vignettes/rTANDEM.Rnw
R/results.R R/rTANDEM.R R/accessors.R R/visualizers.R R/parameters.R R/converters.R
src/mbiomlreport.h
src/saxgamlhandler.h
src/saxtaxhandler.h
src/loadmspectrum.h
src/mscorepam.h
src/mplugin.cpp
src/saxsaphandler.h
src/mpmods.cpp
src/loadmspectrum.cpp
src/mspectrum.h
src/saxsaphandler.cpp
src/mhistogram.h
src/mspectrumcondition.h
src/base64.h
src/mscore.cpp
src/saxtandeminputhandler.cpp
src/saxmodhandler.h
src/dataLoader.cpp
src/expat_external.h
src/mrefine.cpp
src/saxgamlhandler.cpp
src/tandem.h
src/mrefine.h
src/mscore.h
src/msequenceserver.h
src/Makevars.win
src/mscore_k.h
src/PTMTreeSearch.cpp
src/saxmzdatahandler.cpp
src/dataLoader.h
src/xmltaxonomy.cpp
src/PTMTreeSearchScore.cpp
src/mxxcleavage.h
src/msequtilities.h
src/mscore_tandem.h
src/mpam.cpp
src/mmotif.h
src/saxhandler.h
src/PTMTreeSearchScore.h
src/xmlparameter.cpp
src/msemistate.h
src/saxmzmlhandler.h
src/base64.cpp
src/saxmzmlhandler.cpp
src/mreport.h
src/mtermmods.cpp
src/xmlparameter.h
src/mspectrumcondition.cpp
src/PTMTreeSearch.h
src/mtermmods.h
src/expat.h
src/saxbiomlhandler.h
src/stdafx.h
src/stdafx.cpp
src/stack_ptmtreesearch.h
src/mpam.h
src/mscorestate.h
src/msequencecollection.h
src/mxxcleavage.cpp
src/mprocess.h
src/mscore_hrk.cpp
src/xmltaxonomy.h
src/saxtaxhandler.cpp
src/msequtilities.cpp
src/msequenceserver.cpp
src/masscalc.h
src/saxmodhandler.cpp
src/mscore_tandem.cpp
src/tandem.cpp
src/saxbiomlhandler.cpp
src/mscore_k.cpp
src/mreport.cpp
src/Makevars.in
src/Makevars
src/saxmzdatahandler.h
src/saxmzxmlhandler.h
src/saxhandler.cpp
src/expat_old.h
src/saxmzxmlhandler.cpp
src/masscalc.cpp
src/msequence.h
src/mpmods.h
src/mbiomlreport.cpp
src/resource.h
src/mscore_hrk.h
src/mplugin.h
src/mcleave.h
src/mdomains.h
src/msequencecollection.cpp
src/saxtandeminputhandler.h
src/mprocess.cpp
src/expat_external_old.h
man/rTResult-class.Rd man/parameters.Rd man/accessors.Rd man/visualizers.Rd man/tandem.Rd man/rTANDEM-package.Rd man/converters.Rd
build/vignette.rds
rTANDEM documentation built on May 2, 2018, 2:43 a.m.