API for rTANDEM
Interfaces the tandem protein identification algorithm in R
| Global functions | |
|---|---|
| .checkParam | Source code |
| AddTaxon | Man page |
| GetDegeneracy | Man page Source code |
| GetParamFromXML | Man page Source code |
| GetPeptides | Man page Source code |
| GetProteins | Man page Source code |
| GetResultsFromXML | Man page Source code |
| GetTaxoFromXML | Man page Source code |
| SetParamDefault | Man page |
| SetParamIonTrap | Man page |
| SetParamOrbitrap | Man page |
| SetParamPTMTreeSearch | Man page |
| SetParamQuadTof05da | Man page |
| SetParamQuadTof100ppm | Man page |
| SetParamValue | Man page |
| WriteParamToXML | Man page Source code |
| WriteTaxoToXML | Man page Source code |
| addTaxon | Man page Source code |
| getDegeneracy | Man page |
| getParamFromXML | Man page |
| getPeptides | Man page |
| getProteins | Man page |
| getResultsFromXML | Man page |
| getTaxoFromXML | Man page |
| ms2.plot | Man page Source code |
| print.rTParam | Man page Source code |
| rTANDEM | Man page |
| rTANDEM-package | Man page |
| rTParam | Man page Source code |
| rTResult-class | Man page |
| rTResult_s-class | Man page |
| rTTaxo | Man page Source code |
| rtandem | Man page |
| setParamDefault | Man page Source code |
| setParamIonTrap | Man page Source code |
| setParamOrbitrap | Man page Source code |
| setParamPTMTreeSearch | Man page Source code |
| setParamQuadTof05da | Man page Source code |
| setParamQuadTof100ppm | Man page Source code |
| setParamValue | Man page Source code |
| tandem | Man page Source code |
| writeParamToXML | Man page |
| writeTaxoToXML | Man page |
