getXrefList: Get Xref List

Description Usage Arguments Value Examples

View source: R/getXrefList.R

Description

Retrieve the Xref identifiers for a specific pathway in a particular system code

Usage

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getXrefList(pathway, systemCode)

Arguments

pathway

WikiPathways identifier (WPID) for the pathway to download, e.g. WP4

systemCode

(character) The BridgeDb code associated with the data source or system, e.g., En (Ensembl), L (Entrez), Ch (HMDB), etc. See column two of https://github.com/bridgedb/BridgeDb/blob/master/org.bridgedb.bio/resources/org/bridgedb/bio/datasources.txt.

Value

A list of Xrefs identifiers

Examples

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{
xrefs = getXrefList("WP2338", "L")
}

rWikiPathways documentation built on Feb. 28, 2021, 2:01 a.m.