rama: Robust Analysis of MicroArrays

Robust estimation of cDNA microarray intensities with replicates. The package uses a Bayesian hierarchical model for the robust estimation. Outliers are modeled explicitly using a t-distribution, and the model also addresses classical issues such as design effects, normalization, transformation, and nonconstant variance.

Getting started

Package details

AuthorRaphael Gottardo
Bioconductor views Microarray Preprocessing QualityControl TwoChannel
MaintainerRaphael Gottardo <raph@stat.ubc.ca>
LicenseGPL (>= 2)
Package repositoryView on Bioconductor
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rama documentation built on April 29, 2020, 2:27 a.m.