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Robust estimation of cDNA microarray intensities with replicates. The package uses a Bayesian hierarchical model for the robust estimation. Outliers are modeled explicitly using a tdistribution, and the model also addresses classical issues such as design effects, normalization, transformation, and nonconstant variance.
Package details 


Author  Raphael Gottardo 
Bioconductor views  Microarray Preprocessing QualityControl TwoChannel 
Maintainer  Raphael Gottardo <raph@stat.ubc.ca> 
License  GPL (>= 2) 
Version  1.62.0 
Package repository  View on Bioconductor 
Installation 
Install the latest version of this package by entering the following in R:

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