recount3: Explore and download data from the recount3 project

The recount3 package enables access to a large amount of uniformly processed RNA-seq data from human and mouse. You can download RangedSummarizedExperiment objects at the gene, exon or exon-exon junctions level with sample metadata and QC statistics. In addition we provide access to sample coverage BigWig files.

Package details

AuthorLeonardo Collado-Torres [aut, cre] (<>)
Bioconductor views Coverage DataImport DifferentialExpression GeneExpression RNASeq Sequencing Software
MaintainerLeonardo Collado-Torres <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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recount3 documentation built on Feb. 13, 2021, 2 a.m.