Generate HTML or PDF reports for a set of regions or DESeq2/edgeR results.

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Description

Generate an HTML reports to explore a set of regions such as the results from annotation-agnostic expression analysis of RNA-seq data at base-pair resolution performed by derfinder. The package can also be used to generate reports for DESeq2 or edgeR results. The HTML and PDF reports are generated using rmarkdown (http://rmarkdown.rstudio.com/).

Author(s)

Leonardo Collado-Torres <lcollado@jhsph.edu>