regionReport: Generate HTML or PDF reports for a set of genomic regions or DESeq2/edgeR results

Generate HTML or PDF reports to explore a set of regions such as the results from annotation-agnostic expression analysis of RNA-seq data at base-pair resolution performed by derfinder. You can also create reports for DESeq2 or edgeR results.

Package details

AuthorLeonardo Collado-Torres [aut, cre] (<>), Andrew E. Jaffe [aut] (<>), Jeffrey T. Leek [aut, ths] (<>)
Bioconductor views Coverage DifferentialExpression DifferentialMethylation DifferentialPeakCalling ImmunoOncology QualityControl RNASeq ReportWriting Sequencing Software Transcription Visualization
MaintainerLeonardo Collado-Torres <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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regionReport documentation built on Dec. 20, 2020, 2:01 a.m.