rgsepd: Gene Set Enrichment / Projection Displays

R/GSEPD is a bioinformatics package for R to help disambiguate transcriptome samples (a matrix of RNA-Seq counts at transcript IDs) by automating differential expression (with DESeq2), then gene set enrichment (with GOSeq), and finally a N-dimensional projection to quantify in which ways each sample is like either treatment group.

Package details

AuthorKarl Stamm
Bioconductor views DifferentialExpression GeneSetEnrichment ImmunoOncology RNASeq Software
MaintainerKarl Stamm <[email protected]>
Package repositoryView on Bioconductor
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rgsepd documentation built on Oct. 31, 2019, 7:23 a.m.