rgsepd: Gene Set Enrichment / Projection Displays
Version 1.8.0

R/GSEPD is a bioinformatics package for R to help disambiguate transcriptome samples (a matrix of RNA-Seq counts at RefSeq IDs) by automating differential expression (with DESeq2), then gene set enrichment (with GOSeq), and finally a N-dimensional projection to quantify in which ways each sample is like either treatment group.

Package details

AuthorKarl Stamm
Bioconductor views DifferentialExpression GeneSetEnrichment RNASeq Software
MaintainerKarl Stamm <[email protected]>
LicenseGPL-3
Version1.8.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("rgsepd")

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rgsepd documentation built on May 31, 2017, 1:37 p.m.