Files in riboSeqR
Analysis of sequencing data from ribosome profiling experiments
NAMESPACE
DESCRIPTION
build/vignette.rds
R/riboSeq-internal.R
R/frameShift.R
R/lengthDist.R
R/tableOverlaps.R
R/sliceCounts.R
R/findCDS.R
R/logoContext.R
R/plotCodons.R
R/riboCoding-methods.R
R/AllClasses.R
R/frameCounting.R
R/libScales.R
R/filterHits.R
R/plotTranscript.R
R/readRibodata.R
vignettes/riboSeqR.Rnw
vignettes/_TZ_14128-node7-plantsci-internal-cam-ac-uk.tex
man/lengthDist.Rd
man/riboCoding-class.Rd
man/frameShift.Rd
man/riboSeqR-package.Rd
man/findCDS.Rd
man/rnaCounts.Rd
man/plotCDS.Rd
man/readRibodata.Rd
man/sliceCounts.Rd
man/riboData-class.Rd
man/logoContext.Rd
man/plotTranscript.Rd
man/frameCounting.Rd
man/libScales.Rd
man/filterHits.Rd
tests/runTests.R
inst/NEWS
inst/CITATION
inst/doc/riboSeqR.pdf
inst/doc/riboSeqR.Rnw
inst/doc/riboSeqR.R
inst/extdata/chlamy236_plus_deNovo_plusOnly_Index17
inst/extdata/rsem_chlamy236_deNovo.transcripts.fa
inst/extdata/unit_test.fasta
inst/extdata/chlamy236_plus_deNovo_plusOnly_Index12
inst/extdata/chlamy236_plus_deNovo_plusOnly_Index5
inst/extdata/chlamy236_plus_deNovo_plusOnly_Index14
inst/extdata/chlamy236_plus_deNovo_plusOnly_Index16
inst/extdata/ribotable.txt
inst/extdata/chlamy236_plus_deNovo_plusOnly_Index7
inst/extdata/chlamy236_plus_deNovo_plusOnly_Index10
inst/extdata/chlamy236_plus_deNovo_plusOnly_Index17_short
inst/extdata/chlamy236_plus_deNovo_plusOnly_Index3
inst/unitTests/testing.R
