IntegerRangesList-methods: Ranges on a Genome
In rtracklayer: R interface to genome annotation files and the UCSC genome browser
Description
Accessors
Author(s)
Description
Genomic coordinates are often specified in terms of a genome identifier,
chromosome name, start position and end
position. The rtracklayer package adds convenience methods to
IntegerRangesList for the manipulation of genomic ranges.
The spaces (or names) of IntegerRangesList are the chromosome names.
The universe slot indicates the genome, usually as given by UCSC
(e.g. “hg18”).
Accessors
In the code snippets below,
x is a IntegerRangesList object.
-
chrom(x), chrom(x) <- value: Gets or sets the chromosome
names for x. This is an alias for
names(x).
Author(s)
Michael Lawrence
rtracklayer documentation built on Nov. 8, 2020, 6:50 p.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Accessors Author(s)
Description
Genomic coordinates are often specified in terms of a genome identifier,
chromosome name, start position and end
position. The rtracklayer package adds convenience methods to
IntegerRangesList for the manipulation of genomic ranges.
The spaces (or names) of IntegerRangesList are the chromosome names.
The universe slot indicates the genome, usually as given by UCSC
(e.g. “hg18”).
Accessors
In the code snippets below,
x is a IntegerRangesList object.
-
chrom(x), chrom(x) <- value: Gets or sets the chromosome names forx. This is an alias fornames(x).
Author(s)
Michael Lawrence
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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