tracks-methods: Accessing track names
In rtracklayer: R interface to genome annotation files and the UCSC genome browser
Description
Methods for getting and setting track names.
Methods
The following methods are defined by rtracklayer for getting
track names via the generic trackNames(object, ...).
- object = "UCSCSession"
Get the tracks loaded in the session.
- object = "UCSCTrackModes"
Get the visible tracks according to
the modes (all tracks not set to "hide").
- object = "UCSCView"
Get the visible tracks in the view.
The following methods are defined by rtracklayer for setting
track names via the generic trackNames(object) <- value.
- object = "UCSCTrackModes"
Sets the tracks that should be
visible in the modes. All specified tracks with mode "hide" in
object are set to mode "full". Any tracks in object that
are not specified in the value are set to "hide". No other modes are
changed.
- object = "UCSCView"
Sets the visible tracks in the view. This
opens a new web browser with only the specified tracks visible.
rtracklayer documentation built on Nov. 8, 2020, 6:50 p.m.
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Description
Methods for getting and setting track names.
Methods
The following methods are defined by rtracklayer for getting
track names via the generic trackNames(object, ...).
- object = "UCSCSession"
Get the tracks loaded in the session.
- object = "UCSCTrackModes"
Get the visible tracks according to the modes (all tracks not set to "hide").
- object = "UCSCView"
Get the visible tracks in the view.
The following methods are defined by rtracklayer for setting
track names via the generic trackNames(object) <- value.
- object = "UCSCTrackModes"
Sets the tracks that should be visible in the modes. All specified tracks with mode "hide" in
objectare set to mode "full". Any tracks inobjectthat are not specified in the value are set to "hide". No other modes are changed.- object = "UCSCView"
Sets the visible tracks in the view. This opens a new web browser with only the specified tracks visible.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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